Analysis of Ligand-Protein Contacts in PDB entry:
6MBO


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 28 ligands in PDB entry 6MBO. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
JDG
A
1301 38 BENZODIAZEPIN-5-AMINE
lig 2
JDG
A
1302 38 BENZODIAZEPIN-5-AMINE
lig 3
ZN
A
1303 1ZINC ION
lig 4
ZN
A
1304 1ZINC ION
lig 5
ZN
A
1305 1ZINC ION
lig 6
ZN
A
1306 1ZINC ION
lig 7
SAH
A
1307 26S-ADENOSYL-L-HOMOCYSTEINE
lig 8
EDO
A
1308 41,2-ETHANEDIOL
lig 9
EDO
A
1309 41,2-ETHANEDIOL
lig 10
EDO
A
1310 41,2-ETHANEDIOL
lig 11
EDO
A
1311 41,2-ETHANEDIOL
lig 12
EDO
A
1312 41,2-ETHANEDIOL
lig 13
EDO
A
1313 41,2-ETHANEDIOL
lig 14
EDO
A
1314 41,2-ETHANEDIOL
lig 15
EDO
A
1315 41,2-ETHANEDIOL
lig 16
JDG
B
1301 38 BENZODIAZEPIN-5-AMINE
lig 17
JDG
B
1302 38 BENZODIAZEPIN-5-AMINE
lig 18
ZN
B
1303 1ZINC ION
lig 19
ZN
B
1304 1ZINC ION
lig 20
ZN
B
1305 1ZINC ION
lig 21
ZN
B
1306 1ZINC ION
lig 22
SAH
B
1307 26S-ADENOSYL-L-HOMOCYSTEINE
lig 23
EDO
B
1308 41,2-ETHANEDIOL
lig 24
EDO
B
1309 41,2-ETHANEDIOL
lig 25
EDO
B
1310 41,2-ETHANEDIOL
lig 26
EDO
B
1311 41,2-ETHANEDIOL
lig 27
EDO
B
1312 41,2-ETHANEDIOL
lig 28
EDO
B
1313 41,2-ETHANEDIOL