Analysis of Ligand-Protein Contacts in PDB entry:
6MDT


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 71 ligands in PDB entry 6MDT. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
A
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
A
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
A
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
A
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
A
5 11ALPHA-D-MANNOPYRANOSE
lig 6
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 9
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 10
MAN
C
5 11ALPHA-D-MANNOPYRANOSE
lig 11
MAN
C
6 11ALPHA-D-MANNOPYRANOSE
lig 12
MAN
C
7 11ALPHA-D-MANNOPYRANOSE
lig 13
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
BMA
I
3 11BETA-D-MANNOPYRANOSE
lig 18
MAN
I
4 11ALPHA-D-MANNOPYRANOSE
lig 19
MAN
I
5 11ALPHA-D-MANNOPYRANOSE
lig 20
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
BMA
J
3 11BETA-D-MANNOPYRANOSE
lig 23
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
BMA
K
3 11BETA-D-MANNOPYRANOSE
lig 26
MAN
K
4 11ALPHA-D-MANNOPYRANOSE
lig 27
MAN
K
5 11ALPHA-D-MANNOPYRANOSE
lig 28
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
BMA
M
3 11BETA-D-MANNOPYRANOSE
lig 31
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
BMA
N
3 11BETA-D-MANNOPYRANOSE
lig 34
MAN
N
4 11ALPHA-D-MANNOPYRANOSE
lig 35
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
BMA
O
3 11BETA-D-MANNOPYRANOSE
lig 38
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 39
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
BMA
P
3 11BETA-D-MANNOPYRANOSE
lig 41
MAN
P
4 11ALPHA-D-MANNOPYRANOSE
lig 42
NAG
Q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 43
NAG
Q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 44
BMA
Q
3 11BETA-D-MANNOPYRANOSE
lig 45
MAN
Q
4 11ALPHA-D-MANNOPYRANOSE
lig 46
MAN
Q
5 11ALPHA-D-MANNOPYRANOSE
lig 47
NAG
R
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 48
NAG
R
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 49
BMA
R
3 11BETA-D-MANNOPYRANOSE
lig 50
MAN
R
4 11ALPHA-D-MANNOPYRANOSE
lig 51
NAG
S
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 52
NAG
S
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 53
BMA
S
3 11BETA-D-MANNOPYRANOSE
lig 54
NAG
T
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 55
NAG
T
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 56
BMA
T
3 11BETA-D-MANNOPYRANOSE
lig 57
MAN
T
4 11ALPHA-D-MANNOPYRANOSE
lig 58
MAN
T
5 11ALPHA-D-MANNOPYRANOSE
lig 59
MAN
T
6 11ALPHA-D-MANNOPYRANOSE
lig 60
MAN
T
7 11ALPHA-D-MANNOPYRANOSE
lig 61
MAN
T
8 11ALPHA-D-MANNOPYRANOSE
lig 62
MAN
T
9 11ALPHA-D-MANNOPYRANOSE
lig 63
NAG
B
701 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 64
NAG
B
702 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 65
NAG
B
703 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 66
NAG
G
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 67
NAG
G
602 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 68
NAG
G
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 69
NAG
G
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 70
NAG
G
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 71
NAG
G
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE