Analysis of Ligand-Protein Contacts in PDB entry:
6MF0


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 37 ligands in PDB entry 6MF0. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
C
5 11ALPHA-D-MANNOPYRANOSE
lig 6
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 9
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 12
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
E
5 11ALPHA-D-MANNOPYRANOSE
lig 14
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 17
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 18
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 19
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 22
MAN
G
4 11ALPHA-D-MANNOPYRANOSE
lig 23
NAG
G
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
MAN
G
6 11ALPHA-D-MANNOPYRANOSE
lig 25
FUC
G
7 10ALPHA-L-FUCOPYRANOSE
lig 26
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 29
MAN
H
4 11ALPHA-D-MANNOPYRANOSE
lig 30
MAN
H
5 11ALPHA-D-MANNOPYRANOSE
lig 31
MAN
H
6 11ALPHA-D-MANNOPYRANOSE
lig 32
CA
A
2414 1CALCIUM ION
lig 33
ZN
A
2415 1ZINC ION
lig 34
CU1
A
2416 1COPPER (I) ION
lig 35
CA
B
2419 1CALCIUM ION
lig 36
ZN
B
2420 1ZINC ION
lig 37
CU1
B
2421 1COPPER (I) ION