Analysis of Ligand-Protein Contacts in PDB entry:
6MIY


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 25 ligands in PDB entry 6MIY. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
FUC
K
3 10ALPHA-L-FUCOPYRANOSE
lig 8
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
L
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
FUC
M
3 10ALPHA-L-FUCOPYRANOSE
lig 13
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NA
C
301 1SODIUM ION
lig 16
NA
D
301 1SODIUM ION
lig 17
CL
D
302 1CHLORIDE ION
lig 18
JTV
A
308 67 OXY]-3,4-DIHYDROXYOCTADECAN-2-YL}HEXACOSA
lig 19
GOL
A
309 6GLYCEROL
lig 20
GOL
A
310 6GLYCEROL
lig 21
JTV
E
508 67 OXY]-3,4-DIHYDROXYOCTADECAN-2-YL}HEXACOSA
lig 22
GOL
E
509 6GLYCEROL
lig 23
GOL
G
301 6GLYCEROL
lig 24
NA
G
302 1SODIUM ION
lig 25
NA
H
301 1SODIUM ION