Analysis of Ligand-Protein Contacts in PDB entry:
6MM6


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 10 ligands in PDB entry 6MM6. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
TPO
C
197 11PHOSPHOTHREONINE
lig 2
SEP
C
338 10PHOSPHOSERINE
lig 3
TPO
E
197 11PHOSPHOTHREONINE
lig 4
SEP
E
338 10PHOSPHOSERINE
lig 5
ACT
C
401 4ACETATE ION
lig 6
PGE
C
403 10TRIETHYLENE GLYCOL
lig 7
CL
C
404 1CHLORIDE ION
lig 8
EDO
E
402 41,2-ETHANEDIOL
lig 9
CL
E
403 1CHLORIDE ION
lig 10
CL
F
3001 1CHLORIDE ION