Analysis of Ligand-Protein Contacts in PDB entry:
6MM7


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 22 ligands in PDB entry 6MM7. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
TPO
A
197 11PHOSPHOTHREONINE
lig 2
SEP
A
338 10PHOSPHOSERINE
lig 3
TPO
D
197 11PHOSPHOTHREONINE
lig 4
SEP
D
338 10PHOSPHOSERINE
lig 5
FMT
A
401 3FORMIC ACID
lig 6
FMT
A
402 3FORMIC ACID
lig 7
ACY
A
403 4ACETIC ACID
lig 8
FMT
A
404 3FORMIC ACID
lig 9
FMT
A
405 3FORMIC ACID
lig 10
EDO
A
407 41,2-ETHANEDIOL
lig 11
EDO
C
3001 41,2-ETHANEDIOL
lig 12
FMT
D
401 3FORMIC ACID
lig 13
FMT
D
402 3FORMIC ACID
lig 14
FMT
D
403 3FORMIC ACID
lig 15
FMT
D
404 3FORMIC ACID
lig 16
CL
D
406 1CHLORIDE ION
lig 17
EDO
D
407 41,2-ETHANEDIOL
lig 18
EDO
D
408 41,2-ETHANEDIOL
lig 19
EDO
D
409 41,2-ETHANEDIOL
lig 20
EDO
D
410 41,2-ETHANEDIOL
lig 21
CL
E
3001 1CHLORIDE ION
lig 22
EDO
E
3002 41,2-ETHANEDIOL