Analysis of Ligand-Protein Contacts in PDB entry:
6NB3


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 160 ligands in PDB entry 6NB3. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 6
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
BMA
I
3 11BETA-D-MANNOPYRANOSE
lig 9
MAN
I
4 11ALPHA-D-MANNOPYRANOSE
lig 10
MAN
I
5 11ALPHA-D-MANNOPYRANOSE
lig 11
MAN
I
6 11ALPHA-D-MANNOPYRANOSE
lig 12
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
BMA
J
3 11BETA-D-MANNOPYRANOSE
lig 15
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
BMA
K
3 11BETA-D-MANNOPYRANOSE
lig 18
MAN
K
4 11ALPHA-D-MANNOPYRANOSE
lig 19
MAN
K
5 11ALPHA-D-MANNOPYRANOSE
lig 20
MAN
K
6 11ALPHA-D-MANNOPYRANOSE
lig 21
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
BMA
M
3 11BETA-D-MANNOPYRANOSE
lig 24
MAN
M
4 11ALPHA-D-MANNOPYRANOSE
lig 25
MAN
M
5 11ALPHA-D-MANNOPYRANOSE
lig 26
MAN
M
6 11ALPHA-D-MANNOPYRANOSE
lig 27
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
BMA
N
3 11BETA-D-MANNOPYRANOSE
lig 30
MAN
N
4 11ALPHA-D-MANNOPYRANOSE
lig 31
MAN
N
5 11ALPHA-D-MANNOPYRANOSE
lig 32
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
BMA
O
3 11BETA-D-MANNOPYRANOSE
lig 35
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
BMA
P
3 11BETA-D-MANNOPYRANOSE
lig 38
MAN
P
4 11ALPHA-D-MANNOPYRANOSE
lig 39
MAN
P
5 11ALPHA-D-MANNOPYRANOSE
lig 40
MAN
P
6 11ALPHA-D-MANNOPYRANOSE
lig 41
NAG
Q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 42
NAG
Q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 43
BMA
Q
3 11BETA-D-MANNOPYRANOSE
lig 44
MAN
Q
4 11ALPHA-D-MANNOPYRANOSE
lig 45
NAG
R
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 46
NAG
R
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
BMA
R
3 11BETA-D-MANNOPYRANOSE
lig 48
NAG
S
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 49
NAG
S
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 50
NAG
T
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 51
NAG
T
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 52
NAG
U
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 53
NAG
U
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 54
NAG
V
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 55
NAG
V
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 56
BMA
V
3 11BETA-D-MANNOPYRANOSE
lig 57
NAG
W
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 58
NAG
W
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 59
BMA
W
3 11BETA-D-MANNOPYRANOSE
lig 60
MAN
W
4 11ALPHA-D-MANNOPYRANOSE
lig 61
MAN
W
5 11ALPHA-D-MANNOPYRANOSE
lig 62
NAG
X
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 63
NAG
X
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 64
NAG
Y
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 65
NAG
Y
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 66
BMA
Y
3 11BETA-D-MANNOPYRANOSE
lig 67
NAG
Z
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 68
NAG
Z
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 69
BMA
Z
3 11BETA-D-MANNOPYRANOSE
lig 70
MAN
Z
4 11ALPHA-D-MANNOPYRANOSE
lig 71
MAN
Z
5 11ALPHA-D-MANNOPYRANOSE
lig 72
MAN
Z
6 11ALPHA-D-MANNOPYRANOSE
lig 73
NAG
a
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 74
NAG
a
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 75
BMA
a
3 11BETA-D-MANNOPYRANOSE
lig 76
NAG
b
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 77
NAG
b
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 78
BMA
b
3 11BETA-D-MANNOPYRANOSE
lig 79
MAN
b
4 11ALPHA-D-MANNOPYRANOSE
lig 80
MAN
b
5 11ALPHA-D-MANNOPYRANOSE
lig 81
MAN
b
6 11ALPHA-D-MANNOPYRANOSE
lig 82
NAG
c
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 83
NAG
c
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 84
BMA
c
3 11BETA-D-MANNOPYRANOSE
lig 85
MAN
c
4 11ALPHA-D-MANNOPYRANOSE
lig 86
MAN
c
5 11ALPHA-D-MANNOPYRANOSE
lig 87
MAN
c
6 11ALPHA-D-MANNOPYRANOSE
lig 88
NAG
d
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 89
NAG
d
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 90
BMA
d
3 11BETA-D-MANNOPYRANOSE
lig 91
MAN
d
4 11ALPHA-D-MANNOPYRANOSE
lig 92
MAN
d
5 11ALPHA-D-MANNOPYRANOSE
lig 93
NAG
e
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 94
NAG
e
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 95
BMA
e
3 11BETA-D-MANNOPYRANOSE
lig 96
NAG
f
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 97
NAG
f
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 98
NAG
g
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 99
NAG
g
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 100
BMA
g
3 11BETA-D-MANNOPYRANOSE
lig 101
NAG
h
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 102
NAG
h
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 103
NAG
i
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 104
NAG
i
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 105
NAG
j
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 106
NAG
j
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 107
BMA
j
3 11BETA-D-MANNOPYRANOSE
lig 108
NAG
k
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 109
NAG
k
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 110
BMA
k
3 11BETA-D-MANNOPYRANOSE
lig 111
MAN
k
4 11ALPHA-D-MANNOPYRANOSE
lig 112
MAN
k
5 11ALPHA-D-MANNOPYRANOSE
lig 113
NAG
l
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 114
NAG
l
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 115
NAG
m
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 116
NAG
m
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 117
BMA
m
3 11BETA-D-MANNOPYRANOSE
lig 118
NAG
n
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 119
NAG
n
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 120
BMA
n
3 11BETA-D-MANNOPYRANOSE
lig 121
MAN
n
4 11ALPHA-D-MANNOPYRANOSE
lig 122
MAN
n
5 11ALPHA-D-MANNOPYRANOSE
lig 123
MAN
n
6 11ALPHA-D-MANNOPYRANOSE
lig 124
NAG
o
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 125
NAG
o
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 126
BMA
o
3 11BETA-D-MANNOPYRANOSE
lig 127
NAG
p
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 128
NAG
p
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 129
BMA
p
3 11BETA-D-MANNOPYRANOSE
lig 130
NAG
q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 131
NAG
q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 132
BMA
q
3 11BETA-D-MANNOPYRANOSE
lig 133
MAN
q
4 11ALPHA-D-MANNOPYRANOSE
lig 134
MAN
q
5 11ALPHA-D-MANNOPYRANOSE
lig 135
NAG
r
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 136
NAG
r
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 137
NAG
s
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 138
NAG
s
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 139
NAG
t
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 140
NAG
t
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 141
BMA
t
3 11BETA-D-MANNOPYRANOSE
lig 142
NAG
u
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 143
NAG
u
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 144
NAG
v
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 145
NAG
v
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 146
NAG
w
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 147
NAG
w
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 148
NAG
x
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 149
NAG
x
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 150
BMA
x
3 11BETA-D-MANNOPYRANOSE
lig 151
NAG
y
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 152
NAG
y
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 153
BMA
y
3 11BETA-D-MANNOPYRANOSE
lig 154
MAN
y
4 11ALPHA-D-MANNOPYRANOSE
lig 155
MAN
y
5 11ALPHA-D-MANNOPYRANOSE
lig 156
NAG
A
1445 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 157
NAG
B
1442 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 158
NAG
C
1423 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 159
NAG
C
1428 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 160
NAG
C
1429 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE