Analysis of Ligand-Protein Contacts in PDB entry:
6NDG


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 37 ligands in PDB entry 6NDG. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SO4
A
201 5SULFATE ION
lig 2
SO4
A
202 5SULFATE ION
lig 3
SO4
B
201 5SULFATE ION
lig 4
Y1
C
401 1YTTRIUM ION
lig 5
NA
C
402 1SODIUM ION
lig 6
CL
C
403 1CHLORIDE ION
lig 7
CL
C
404 1CHLORIDE ION
lig 8
SO4
D
201 5SULFATE ION
lig 9
NH4
D
202 1AMMONIUM ION
lig 10
SO4
E
201 5SULFATE ION
lig 11
CL
E
202 1CHLORIDE ION
lig 12
SO4
E
203 5SULFATE ION
lig 13
Y1
F
401 1YTTRIUM ION
lig 14
NA
F
402 1SODIUM ION
lig 15
SO4
G
201 5SULFATE ION
lig 16
CL
H
201 1CHLORIDE ION
lig 17
SO4
H
202 5SULFATE ION
lig 18
Y1
I
401 1YTTRIUM ION
lig 19
NA
I
402 1SODIUM ION
lig 20
SO4
J
201 5SULFATE ION
lig 21
CL
J
202 1CHLORIDE ION
lig 22
CL
K
201 1CHLORIDE ION
lig 23
SO4
K
202 5SULFATE ION
lig 24
Y1
L
401 1YTTRIUM ION
lig 25
NA
L
402 1SODIUM ION
lig 26
CL
L
403 1CHLORIDE ION
lig 27
CL
M
201 1CHLORIDE ION
lig 28
SO4
N
201 5SULFATE ION
lig 29
Y1
O
401 1YTTRIUM ION
lig 30
NA
O
402 1SODIUM ION
lig 31
SO4
O
403 5SULFATE ION
lig 32
SO4
Q
201 5SULFATE ION
lig 33
SO4
Q
202 5SULFATE ION
lig 34
Y1
R
401 1YTTRIUM ION
lig 35
SO4
R
402 5SULFATE ION
lig 36
CL
R
403 1CHLORIDE ION
lig 37
NA
R
404 1SODIUM ION