Analysis of Ligand-Protein Contacts in PDB entry:
6NEX


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 27 ligands in PDB entry 6NEX. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
PCA
L
1 8PYROGLUTAMIC ACID
lig 2
MLY
L
40 11N-DIMETHYL-LYSINE
lig 3
MLY
L
41 11N-DIMETHYL-LYSINE
lig 4
MLY
L
105 11N-DIMETHYL-LYSINE
lig 5
MLY
L
169 11N-DIMETHYL-LYSINE
lig 6
MLY
L
174 11N-DIMETHYL-LYSINE
lig 7
MLY
L
207 11N-DIMETHYL-LYSINE
lig 8
MLY
H
58 11N-DIMETHYL-LYSINE
lig 9
MLY
H
98 11N-DIMETHYL-LYSINE
lig 10
MLY
H
201 11N-DIMETHYL-LYSINE
lig 11
MLY
H
209 11N-DIMETHYL-LYSINE
lig 12
PCA
A
1 8PYROGLUTAMIC ACID
lig 13
MLY
A
40 11N-DIMETHYL-LYSINE
lig 14
MLY
A
41 11N-DIMETHYL-LYSINE
lig 15
MLY
A
72 11N-DIMETHYL-LYSINE
lig 16
MLY
A
174 11N-DIMETHYL-LYSINE
lig 17
MLY
A
207 11N-DIMETHYL-LYSINE
lig 18
MLY
B
58 11N-DIMETHYL-LYSINE
lig 19
MLY
B
98 11N-DIMETHYL-LYSINE
lig 20
CL
L
301 1CHLORIDE ION
lig 21
CL
L
302 1CHLORIDE ION
lig 22
FMT
L
303 3FORMIC ACID
lig 23
FMT
L
304 3FORMIC ACID
lig 24
FMT
L
305 3FORMIC ACID
lig 25
ACT
H
301 4ACETATE ION
lig 26
CL
A
301 1CHLORIDE ION
lig 27
FMT
A
302 3FORMIC ACID