Analysis of Ligand-Protein Contacts in PDB entry:
6NGD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 11 ligands in PDB entry 6NGD. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
HEM
A
801 43PROTOPORPHYRIN IX CONTAINING FE
lig 2
H4B
A
802 175,6,7,8-TETRAHYDROBIOPTERIN
lig 3
KMS
A
803 25 TRIFLUOROPHENYL}ETHYL)-4-METHYLPYRIDIN-2-
lig 4
GOL
A
804 6GLYCEROL
lig 5
GOL
A
805 6GLYCEROL
lig 6
GOL
A
806 6GLYCEROL
lig 7
ZN
B
801 1ZINC ION
lig 8
HEM
B
802 43PROTOPORPHYRIN IX CONTAINING FE
lig 9
H4B
B
803 175,6,7,8-TETRAHYDROBIOPTERIN
lig 10
KMS
B
804 25 TRIFLUOROPHENYL}ETHYL)-4-METHYLPYRIDIN-2-
lig 11
GOL
B
805 6GLYCEROL