Analysis of Ligand-Protein Contacts in PDB entry:
6NNJ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 42 ligands in PDB entry 6NNJ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
A
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
A
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
A
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
A
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
A
5 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
A
6 11ALPHA-D-MANNOPYRANOSE
lig 7
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 12
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 14
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
BMA
I
3 11BETA-D-MANNOPYRANOSE
lig 17
MAN
I
4 11ALPHA-D-MANNOPYRANOSE
lig 18
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
BMA
N
3 11BETA-D-MANNOPYRANOSE
lig 27
MAN
N
4 11ALPHA-D-MANNOPYRANOSE
lig 28
MAN
N
5 11ALPHA-D-MANNOPYRANOSE
lig 29
MAN
N
6 11ALPHA-D-MANNOPYRANOSE
lig 30
MAN
N
7 11ALPHA-D-MANNOPYRANOSE
lig 31
MAN
N
8 11ALPHA-D-MANNOPYRANOSE
lig 32
MAN
N
9 11ALPHA-D-MANNOPYRANOSE
lig 33
MAN
N
10 11ALPHA-D-MANNOPYRANOSE
lig 34
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
NAG
B
701 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
NAG
B
702 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
NAG
G
614 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 39
NAG
G
615 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
NAG
G
616 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
NAG
G
637 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 42
NAG
G
638 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE