Analysis of Ligand-Protein Contacts in PDB entry:
6O4M


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 59 ligands in PDB entry 6O4M. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
DIL
D
2 8D-ISOLEUCINE
lig 2
DAL
D
4 5D-ALANINE
lig 3
DVA
D
5 7D-VALINE
lig 4
DLE
D
6 8D-LEUCINE
lig 5
DLY
D
7 9D-LYSINE
lig 6
DVA
D
8 7D-VALINE
lig 7
DLE
D
9 8D-LEUCINE
lig 8
DTH
D
10 7D-THREONINE
lig 9
DTH
D
11 7D-THREONINE
lig 10
DLE
D
13 8D-LEUCINE
lig 11
DPR
D
14 7D-PROLINE
lig 12
DAL
D
15 5D-ALANINE
lig 13
DLE
D
16 8D-LEUCINE
lig 14
DIL
D
17 8D-ISOLEUCINE
lig 15
DSN
D
18 6D-SERINE
lig 16
DTR
D
19 14D-TRYPTOPHAN
lig 17
DIL
D
20 8D-ISOLEUCINE
lig 18
DLY
D
21 9D-LYSINE
lig 19
DAR
D
22 11D-ARGININE
lig 20
DLY
D
23 9D-LYSINE
lig 21
DAR
D
24 11D-ARGININE
lig 22
DGN
D
25 9D-GLUTAMINE
lig 23
DGN
D
26 9D-GLUTAMINE
lig 24
NH2
D
27 1AMINO GROUP
lig 25
NH2
A
27 1AMINO GROUP
lig 26
NH2
B
27 1AMINO GROUP
lig 27
DIL
C
2 8D-ISOLEUCINE
lig 28
DAL
C
4 5D-ALANINE
lig 29
DVA
C
5 7D-VALINE
lig 30
DLE
C
6 8D-LEUCINE
lig 31
DLY
C
7 9D-LYSINE
lig 32
DVA
C
8 7D-VALINE
lig 33
DLE
C
9 8D-LEUCINE
lig 34
DTH
C
10 7D-THREONINE
lig 35
DTH
C
11 7D-THREONINE
lig 36
DLE
C
13 8D-LEUCINE
lig 37
DPR
C
14 7D-PROLINE
lig 38
DAL
C
15 5D-ALANINE
lig 39
DLE
C
16 8D-LEUCINE
lig 40
DIL
C
17 8D-ISOLEUCINE
lig 41
DSN
C
18 6D-SERINE
lig 42
DTR
C
19 14D-TRYPTOPHAN
lig 43
DIL
C
20 8D-ISOLEUCINE
lig 44
DLY
C
21 9D-LYSINE
lig 45
DAR
C
22 11D-ARGININE
lig 46
DLY
C
23 9D-LYSINE
lig 47
DAR
C
24 11D-ARGININE
lig 48
DGN
C
25 9D-GLUTAMINE
lig 49
DGN
C
26 9D-GLUTAMINE
lig 50
NH2
C
27 1AMINO GROUP
lig 51
SO4
D
101 5SULFATE ION
lig 52
SO4
D
102 5SULFATE ION
lig 53
SO4
A
101 5SULFATE ION
lig 54
SO4
A
102 5SULFATE ION
lig 55
SO4
B
101 5SULFATE ION
lig 56
SO4
B
102 5SULFATE ION
lig 57
SO4
B
103 5SULFATE ION
lig 58
SO4
C
101 5SULFATE ION
lig 59
SO4
C
102 5SULFATE ION