Analysis of Ligand-Protein Contacts in PDB entry:
6O8U


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 18 ligands in PDB entry 6O8U. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
TPO
A
345 11PHOSPHOTHREONINE
lig 2
SEP
A
346 10PHOSPHOSERINE
lig 3
TPO
B
345 11PHOSPHOTHREONINE
lig 4
SEP
B
346 10PHOSPHOSERINE
lig 5
TPO
C
345 11PHOSPHOTHREONINE
lig 6
SEP
C
346 10PHOSPHOSERINE
lig 7
TPO
D
345 11PHOSPHOTHREONINE
lig 8
SEP
D
346 10PHOSPHOSERINE
lig 9
LS7
A
501 29 CARBOXAMIDE
lig 10
SO4
A
502 5SULFATE ION
lig 11
GOL
A
503 6GLYCEROL
lig 12
LS7
B
501 29 CARBOXAMIDE
lig 13
SO4
B
502 5SULFATE ION
lig 14
LS7
C
501 29 CARBOXAMIDE
lig 15
SO4
C
502 5SULFATE ION
lig 16
LS7
D
501 29 CARBOXAMIDE
lig 17
SO4
D
502 5SULFATE ION
lig 18
SO4
D
503 5SULFATE ION