Analysis of Ligand-Protein Contacts in PDB entry:
6OJB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 6OJB. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
B
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
B
5 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
B
6 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
B
7 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
B
8 11ALPHA-D-MANNOPYRANOSE
lig 9
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 12
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
C
5 11ALPHA-D-MANNOPYRANOSE
lig 14
MAN
C
6 11ALPHA-D-MANNOPYRANOSE
lig 15
MAN
C
7 11ALPHA-D-MANNOPYRANOSE
lig 16
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
A
418 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
A
419 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
X6X
A
420 122-AMINO-2-DEOXY-ALPHA-D-GALACTOPYRANOSE