Analysis of Ligand-Protein Contacts in PDB entry:
6P08


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 10 ligands in PDB entry 6P08. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NMY
A
301 42NEOMYCIN
lig 2
PPV
A
302 9PYROPHOSPHATE
lig 3
MG
A
303 1MAGNESIUM ION
lig 4
MG
A
304 1MAGNESIUM ION
lig 5
AMP
A
305 22ADENOSINE MONOPHOSPHATE
lig 6
AMP
A
306 22ADENOSINE MONOPHOSPHATE
lig 7
NMY
A
307 42NEOMYCIN
lig 8
MG
A
308 1MAGNESIUM ION
lig 9
PPV
D
301 9PYROPHOSPHATE
lig 10
MG
D
302 1MAGNESIUM ION