Analysis of Ligand-Protein Contacts in PDB entry:
6P3R


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 24 ligands in PDB entry 6P3R. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NDG
G
2 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 5
MAN
G
3 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
G
4 11ALPHA-D-MANNOPYRANOSE
lig 7
NDG
G
5 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 8
GLA
G
6 11ALPHA-D-GALACTOPYRANOSE
lig 9
SIA
G
7 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 10
MAN
G
8 11ALPHA-D-MANNOPYRANOSE
lig 11
NAG
H
1 132-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 14
BMA
H
4 11BETA-D-MANNOPYRANOSE
lig 15
NDG
H
5 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 16
GAL
H
6 11BETA-D-GALACTOPYRANOSE
lig 17
SIA
H
7 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 18
Z9N
H
8 12ALPHA-D-FRUCTOFURANOSE
lig 19
PO4
B
301 5PHOSPHATE ION
lig 20
NAG
C
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
PO4
D
301 5PHOSPHATE ION
lig 22
NAG
E
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
PO4
L
301 5PHOSPHATE ION
lig 24
NAG
L
302 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE