Analysis of Ligand-Protein Contacts in PDB entry:
6P4M


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 27 ligands in PDB entry 6P4M. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
F
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
GAL
F
2 11BETA-D-GALACTOPYRANOSE
lig 3
SIA
F
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 4
NAG
G
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
GAL
G
2 11BETA-D-GALACTOPYRANOSE
lig 6
SIA
G
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 7
NAG
H
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
GAL
H
2 11BETA-D-GALACTOPYRANOSE
lig 9
SIA
H
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 10
NAG
I
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
GAL
I
2 11BETA-D-GALACTOPYRANOSE
lig 12
SIA
I
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 13
NAG
J
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
GAL
J
2 11BETA-D-GALACTOPYRANOSE
lig 15
SIA
J
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 16
NAG
K
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
GAL
K
2 11BETA-D-GALACTOPYRANOSE
lig 18
SIA
K
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 19
NAG
L
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
GAL
L
2 11BETA-D-GALACTOPYRANOSE
lig 21
SIA
L
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 22
NAG
M
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
GAL
M
2 11BETA-D-GALACTOPYRANOSE
lig 24
SIA
M
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 25
NAG
N
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
GAL
N
2 11BETA-D-GALACTOPYRANOSE
lig 27
SIA
N
3 20N-ACETYL-ALPHA-NEURAMINIC ACID