Analysis of Ligand-Protein Contacts in PDB entry:
6P8M


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 27 ligands in PDB entry 6P8M. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
A
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
A
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
A
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
A
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
A
5 11ALPHA-D-MANNOPYRANOSE
lig 6
NAG
C
1401 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NH4
C
1402 1AMMONIUM ION
lig 8
NH4
C
1403 1AMMONIUM ION
lig 9
NH4
C
1404 1AMMONIUM ION
lig 10
EDO
C
1405 41,2-ETHANEDIOL
lig 11
EDO
C
1406 41,2-ETHANEDIOL
lig 12
PEG
C
1407 7DI(HYDROXYETHYL)ETHER
lig 13
NA
C
1408 1SODIUM ION
lig 14
NA
C
1409 1SODIUM ION
lig 15
NA
C
1410 1SODIUM ION
lig 16
CL
C
1411 1CHLORIDE ION
lig 17
NAG
C
1417 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
C
1418 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
C
1419 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
C
1420 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
C
1421 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
NAG
C
1422 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
C
1423 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
C
1424 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
PEG
H
301 7DI(HYDROXYETHYL)ETHER
lig 26
NA
H
302 1SODIUM ION
lig 27
NH4
L
301 1AMMONIUM ION