Analysis of Ligand-Protein Contacts in PDB entry:
6PCI


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 27 ligands in PDB entry 6PCI. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
G
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
G
5 11ALPHA-D-MANNOPYRANOSE
lig 6
NAG
T
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
T
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
BMA
T
3 11BETA-D-MANNOPYRANOSE
lig 9
MAN
T
4 11ALPHA-D-MANNOPYRANOSE
lig 10
MAN
T
5 11ALPHA-D-MANNOPYRANOSE
lig 11
NAG
U
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
U
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
BMA
U
3 11BETA-D-MANNOPYRANOSE
lig 14
MAN
U
4 11ALPHA-D-MANNOPYRANOSE
lig 15
MAN
U
5 11ALPHA-D-MANNOPYRANOSE
lig 16
NAG
A
401 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
A
402 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
A
403 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
A
404 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
B
401 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
B
402 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
NAG
B
403 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
B
404 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
C
401 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
NAG
C
402 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
C
403 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
NAG
C
404 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE