Analysis of Ligand-Protein Contacts in PDB entry:
6PD1


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 23 ligands in PDB entry 6PD1. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MG
A
701 1MAGNESIUM ION
lig 2
SO4
A
702 5SULFATE ION
lig 3
SO4
A
703 5SULFATE ION
lig 4
EDO
A
704 41,2-ETHANEDIOL
lig 5
EDO
A
705 41,2-ETHANEDIOL
lig 6
SO4
A
706 5SULFATE ION
lig 7
MG
B
701 1MAGNESIUM ION
lig 8
SO4
B
702 5SULFATE ION
lig 9
EDO
B
703 41,2-ETHANEDIOL
lig 10
SO4
B
704 5SULFATE ION
lig 11
SO4
B
705 5SULFATE ION
lig 12
SO4
B
706 5SULFATE ION
lig 13
EDO
C
1101 41,2-ETHANEDIOL
lig 14
MG
C
1102 1MAGNESIUM ION
lig 15
SO4
C
1103 5SULFATE ION
lig 16
EDO
C
1104 41,2-ETHANEDIOL
lig 17
GOL
C
1105 6GLYCEROL
lig 18
NI
C
1106 1NICKEL (II) ION
lig 19
SO4
C
1107 5SULFATE ION
lig 20
MG
D
701 1MAGNESIUM ION
lig 21
EDO
D
702 41,2-ETHANEDIOL
lig 22
SO4
D
703 5SULFATE ION
lig 23
SO4
D
704 5SULFATE ION