Analysis of Ligand-Protein Contacts in PDB entry:
6PD5


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 18 ligands in PDB entry 6PD5. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SO4
A
1101 5SULFATE ION
lig 2
SO4
A
1102 5SULFATE ION
lig 3
SO4
A
1103 5SULFATE ION
lig 4
SO4
A
1104 5SULFATE ION
lig 5
SO4
A
1105 5SULFATE ION
lig 6
SO4
A
1106 5SULFATE ION
lig 7
SO4
A
1107 5SULFATE ION
lig 8
SO4
A
1108 5SULFATE ION
lig 9
SO4
A
1109 5SULFATE ION
lig 10
SO4
A
1110 5SULFATE ION
lig 11
SO4
A
1111 5SULFATE ION
lig 12
GOL
A
1112 6GLYCEROL
lig 13
GOL
A
1113 6GLYCEROL
lig 14
GOL
A
1114 6GLYCEROL
lig 15
NAG
A
1115 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
A
1116 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
A
1117 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
A
1118 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE