Analysis of Ligand-Protein Contacts in PDB entry:
6PFH


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 6PFH. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NDP
A
601 48 PHOSPHATE
lig 2
UFP
A
602 215-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
lig 3
OFD
A
603 33 CYANOPHENYL]ACETIC ACID
lig 4
MTX
A
604 33METHOTREXATE
lig 5
NDP
B
601 48 PHOSPHATE
lig 6
UFP
B
602 215-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
lig 7
OFD
B
603 33 CYANOPHENYL]ACETIC ACID
lig 8
MTX
B
604 33METHOTREXATE
lig 9
NDP
C
601 48 PHOSPHATE
lig 10
UFP
C
602 215-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
lig 11
OFD
C
603 33 CYANOPHENYL]ACETIC ACID
lig 12
MTX
C
604 33METHOTREXATE
lig 13
NDP
D
601 48 PHOSPHATE
lig 14
UFP
D
602 215-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
lig 15
OFD
D
603 33 CYANOPHENYL]ACETIC ACID
lig 16
MTX
D
604 33METHOTREXATE
lig 17
NDP
E
601 48 PHOSPHATE
lig 18
UFP
E
602 215-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
lig 19
OFD
E
603 33 CYANOPHENYL]ACETIC ACID
lig 20
MTX
E
604 33METHOTREXATE