Analysis of Ligand-Protein Contacts in PDB entry:
6PGL


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 6PGL. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GOL
A
301 6GLYCEROL
lig 2
U5P
A
302 21URIDINE-5'-MONOPHOSPHATE
lig 3
PGE
A
303 10TRIETHYLENE GLYCOL
lig 4
PGE
A
304 10TRIETHYLENE GLYCOL
lig 5
PGE
A
305 10TRIETHYLENE GLYCOL
lig 6
U5P
B
301 21URIDINE-5'-MONOPHOSPHATE
lig 7
PGE
B
302 10TRIETHYLENE GLYCOL
lig 8
EDO
B
303 41,2-ETHANEDIOL
lig 9
EDO
B
304 41,2-ETHANEDIOL
lig 10
EDO
B
305 41,2-ETHANEDIOL
lig 11
PG6
B
306 18 ETHOXY}-ETHANE
lig 12
GOL
C
301 6GLYCEROL
lig 13
U5P
C
302 21URIDINE-5'-MONOPHOSPHATE
lig 14
PGE
C
303 10TRIETHYLENE GLYCOL
lig 15
EDO
C
304 41,2-ETHANEDIOL
lig 16
EDO
C
305 41,2-ETHANEDIOL
lig 17
EDO
C
306 41,2-ETHANEDIOL
lig 18
PG4
C
307 13TETRAETHYLENE GLYCOL
lig 19
PG6
C
308 18 ETHOXY}-ETHANE