Analysis of Ligand-Protein Contacts in PDB entry:
6PKG


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 73 ligands in PDB entry 6PKG. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
C
5 11ALPHA-D-MANNOPYRANOSE
lig 6
FUC
C
6 10ALPHA-L-FUCOPYRANOSE
lig 7
NAG
A
407 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
IOD
A
408 1IODIDE ION
lig 9
IOD
A
409 1IODIDE ION
lig 10
IOD
A
410 1IODIDE ION
lig 11
IOD
A
411 1IODIDE ION
lig 12
IOD
A
412 1IODIDE ION
lig 13
IOD
A
413 1IODIDE ION
lig 14
IOD
A
414 1IODIDE ION
lig 15
IOD
A
415 1IODIDE ION
lig 16
IOD
A
416 1IODIDE ION
lig 17
IOD
A
417 1IODIDE ION
lig 18
IOD
A
418 1IODIDE ION
lig 19
IOD
A
419 1IODIDE ION
lig 20
IOD
A
420 1IODIDE ION
lig 21
IOD
A
421 1IODIDE ION
lig 22
IOD
A
422 1IODIDE ION
lig 23
IOD
A
423 1IODIDE ION
lig 24
IOD
A
424 1IODIDE ION
lig 25
IOD
A
425 1IODIDE ION
lig 26
IOD
A
426 1IODIDE ION
lig 27
IOD
A
427 1IODIDE ION
lig 28
IOD
A
428 1IODIDE ION
lig 29
IOD
A
429 1IODIDE ION
lig 30
I2I
A
430 2MOLECULAR IODINE
lig 31
I2I
A
431 2MOLECULAR IODINE
lig 32
I2I
A
432 2MOLECULAR IODINE
lig 33
I2I
A
433 2MOLECULAR IODINE
lig 34
I2I
A
434 2MOLECULAR IODINE
lig 35
I2I
A
435 2MOLECULAR IODINE
lig 36
I2I
A
436 2MOLECULAR IODINE
lig 37
I2I
A
437 2MOLECULAR IODINE
lig 38
P6G
A
438 19HEXAETHYLENE GLYCOL
lig 39
NAG
B
401 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
NAG
B
402 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
IOD
B
403 1IODIDE ION
lig 42
IOD
B
404 1IODIDE ION
lig 43
IOD
B
405 1IODIDE ION
lig 44
IOD
B
406 1IODIDE ION
lig 45
IOD
B
407 1IODIDE ION
lig 46
IOD
B
408 1IODIDE ION
lig 47
IOD
B
409 1IODIDE ION
lig 48
IOD
B
410 1IODIDE ION
lig 49
IOD
B
411 1IODIDE ION
lig 50
IOD
B
412 1IODIDE ION
lig 51
IOD
B
413 1IODIDE ION
lig 52
IOD
B
414 1IODIDE ION
lig 53
IOD
B
415 1IODIDE ION
lig 54
IOD
B
416 1IODIDE ION
lig 55
IOD
B
417 1IODIDE ION
lig 56
IOD
B
418 1IODIDE ION
lig 57
IOD
B
419 1IODIDE ION
lig 58
IOD
B
420 1IODIDE ION
lig 59
IOD
B
421 1IODIDE ION
lig 60
IOD
B
422 1IODIDE ION
lig 61
IOD
B
423 1IODIDE ION
lig 62
IOD
B
424 1IODIDE ION
lig 63
IOD
B
425 1IODIDE ION
lig 64
IOD
B
426 1IODIDE ION
lig 65
IOD
B
427 1IODIDE ION
lig 66
IOD
B
428 1IODIDE ION
lig 67
I2I
B
429 2MOLECULAR IODINE
lig 68
I2I
B
430 2MOLECULAR IODINE
lig 69
I2I
B
431 2MOLECULAR IODINE
lig 70
I2I
B
432 2MOLECULAR IODINE
lig 71
I2I
B
433 2MOLECULAR IODINE
lig 72
I2I
B
434 2MOLECULAR IODINE
lig 73
I2I
B
435 2MOLECULAR IODINE