Analysis of Ligand-Protein Contacts in PDB entry:
6PLR


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 80 ligands in PDB entry 6PLR. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
UNL
A
503 9UNKNOWN LIGAND
lig 12
UNL
A
504 11UNKNOWN LIGAND
lig 13
UNL
A
505 14UNKNOWN LIGAND
lig 14
UNL
A
506 11UNKNOWN LIGAND
lig 15
UNL
A
507 10UNKNOWN LIGAND
lig 16
UNL
A
508 6UNKNOWN LIGAND
lig 17
UNL
A
509 4UNKNOWN LIGAND
lig 18
GLY
A
510 5GLYCINE
lig 19
UNL
A
511 11UNKNOWN LIGAND
lig 20
OCT
A
512 8N-OCTANE
lig 21
UNL
A
513 7UNKNOWN LIGAND
lig 22
UNL
A
514 12UNKNOWN LIGAND
lig 23
UNL
A
515 11UNKNOWN LIGAND
lig 24
UNL
A
516 7UNKNOWN LIGAND
lig 25
GLY
B
501 5GLYCINE
lig 26
UNL
B
502 11UNKNOWN LIGAND
lig 27
OCT
B
503 8N-OCTANE
lig 28
UNL
B
504 7UNKNOWN LIGAND
lig 29
UNL
B
505 12UNKNOWN LIGAND
lig 30
UNL
B
506 11UNKNOWN LIGAND
lig 31
UNL
B
507 7UNKNOWN LIGAND
lig 32
UNL
B
510 9UNKNOWN LIGAND
lig 33
UNL
B
511 11UNKNOWN LIGAND
lig 34
UNL
B
512 14UNKNOWN LIGAND
lig 35
UNL
B
513 11UNKNOWN LIGAND
lig 36
UNL
B
514 10UNKNOWN LIGAND
lig 37
UNL
B
515 6UNKNOWN LIGAND
lig 38
UNL
B
516 4UNKNOWN LIGAND
lig 39
GLY
C
501 5GLYCINE
lig 40
UNL
C
502 11UNKNOWN LIGAND
lig 41
OCT
C
503 8N-OCTANE
lig 42
UNL
C
504 7UNKNOWN LIGAND
lig 43
UNL
C
505 12UNKNOWN LIGAND
lig 44
UNL
C
506 11UNKNOWN LIGAND
lig 45
UNL
C
507 7UNKNOWN LIGAND
lig 46
UNL
C
510 9UNKNOWN LIGAND
lig 47
UNL
C
511 11UNKNOWN LIGAND
lig 48
UNL
C
512 14UNKNOWN LIGAND
lig 49
UNL
C
513 11UNKNOWN LIGAND
lig 50
UNL
C
514 10UNKNOWN LIGAND
lig 51
UNL
C
515 6UNKNOWN LIGAND
lig 52
UNL
C
516 4UNKNOWN LIGAND
lig 53
GLY
D
501 5GLYCINE
lig 54
UNL
D
502 11UNKNOWN LIGAND
lig 55
OCT
D
503 8N-OCTANE
lig 56
UNL
D
504 7UNKNOWN LIGAND
lig 57
UNL
D
505 12UNKNOWN LIGAND
lig 58
UNL
D
506 11UNKNOWN LIGAND
lig 59
UNL
D
507 7UNKNOWN LIGAND
lig 60
UNL
D
510 9UNKNOWN LIGAND
lig 61
UNL
D
511 11UNKNOWN LIGAND
lig 62
UNL
D
512 14UNKNOWN LIGAND
lig 63
UNL
D
513 11UNKNOWN LIGAND
lig 64
UNL
D
514 10UNKNOWN LIGAND
lig 65
UNL
D
515 6UNKNOWN LIGAND
lig 66
UNL
D
516 4UNKNOWN LIGAND
lig 67
GLY
E
501 5GLYCINE
lig 68
UNL
E
502 11UNKNOWN LIGAND
lig 69
OCT
E
503 8N-OCTANE
lig 70
UNL
E
504 7UNKNOWN LIGAND
lig 71
UNL
E
505 12UNKNOWN LIGAND
lig 72
UNL
E
506 11UNKNOWN LIGAND
lig 73
UNL
E
507 7UNKNOWN LIGAND
lig 74
UNL
E
510 9UNKNOWN LIGAND
lig 75
UNL
E
511 11UNKNOWN LIGAND
lig 76
UNL
E
512 14UNKNOWN LIGAND
lig 77
UNL
E
513 11UNKNOWN LIGAND
lig 78
UNL
E
514 10UNKNOWN LIGAND
lig 79
UNL
E
515 6UNKNOWN LIGAND
lig 80
UNL
E
516 4UNKNOWN LIGAND