Analysis of Ligand-Protein Contacts in PDB entry:
6PME


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 11 ligands in PDB entry 6PME. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SEP
A
677 10PHOSPHOSERINE
lig 2
SEP
B
677 10PHOSPHOSERINE
lig 3
SEP
C
677 10PHOSPHOSERINE
lig 4
ZN
A
801 1ZINC ION
lig 5
OOY
A
802 34N-[2,4-BIS(MORPHOLIN-4-YL)PHENYL]-3-PHENOX
lig 6
SRT
A
803 10S,R MESO-TARTARIC ACID
lig 7
ZN
B
801 1ZINC ION
lig 8
OOY
B
802 34N-[2,4-BIS(MORPHOLIN-4-YL)PHENYL]-3-PHENOX
lig 9
SRT
B
803 10S,R MESO-TARTARIC ACID
lig 10
ZN
C
801 1ZINC ION
lig 11
OOY
C
802 34N-[2,4-BIS(MORPHOLIN-4-YL)PHENYL]-3-PHENOX