Analysis of Ligand-Protein Contacts in PDB entry:
6PQO


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 36 ligands in PDB entry 6PQO. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
JT0
D
1303 22 METHOXYPROPYL)ACETAMIDE
lig 10
LBN
D
1304 321-PALMITOYL-2-OLEOYL-SN-GLYCERO-3-PHOSPHOC
lig 11
LBN
D
1305 521-PALMITOYL-2-OLEOYL-SN-GLYCERO-3-PHOSPHOC
lig 12
6OU
D
1306 41 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 13
6OU
D
1307 28 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 14
6OU
D
1308 41 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 15
6OU
D
1309 29 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 16
6OU
D
1310 33 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 17
6OU
A
1201 33 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 18
JT0
A
1204 22 METHOXYPROPYL)ACETAMIDE
lig 19
LBN
A
1205 321-PALMITOYL-2-OLEOYL-SN-GLYCERO-3-PHOSPHOC
lig 20
LBN
A
1206 521-PALMITOYL-2-OLEOYL-SN-GLYCERO-3-PHOSPHOC
lig 21
6OU
A
1207 28 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 22
6OU
A
1208 29 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 23
6OU
B
1201 33 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 24
JT0
B
1204 22 METHOXYPROPYL)ACETAMIDE
lig 25
LBN
B
1205 321-PALMITOYL-2-OLEOYL-SN-GLYCERO-3-PHOSPHOC
lig 26
LBN
B
1206 521-PALMITOYL-2-OLEOYL-SN-GLYCERO-3-PHOSPHOC
lig 27
6OU
B
1207 41 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 28
6OU
B
1208 28 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 29
6OU
B
1209 29 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 30
6OU
C
1201 29 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 31
6OU
C
1202 33 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 32
JT0
C
1205 22 METHOXYPROPYL)ACETAMIDE
lig 33
LBN
C
1206 321-PALMITOYL-2-OLEOYL-SN-GLYCERO-3-PHOSPHOC
lig 34
LBN
C
1207 521-PALMITOYL-2-OLEOYL-SN-GLYCERO-3-PHOSPHOC
lig 35
6OU
C
1208 41 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 36
6OU
C
1209 28 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD