Analysis of Ligand-Protein Contacts in PDB entry:
6PQP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 36 ligands in PDB entry 6PQP. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
9BE
A
1201 10N-BENZYLTHIOFORMAMIDE
lig 10
6OU
A
1202 28 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 11
6OU
A
1203 29 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 12
6OU
A
1204 48 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 13
6OU
A
1205 41 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 14
LBN
A
1206 521-PALMITOYL-2-OLEOYL-SN-GLYCERO-3-PHOSPHOC
lig 15
6OU
A
1209 33 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 16
9BE
D
1201 10N-BENZYLTHIOFORMAMIDE
lig 17
6OU
D
1202 28 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 18
6OU
D
1203 29 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 19
6OU
D
1204 48 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 20
LBN
D
1205 521-PALMITOYL-2-OLEOYL-SN-GLYCERO-3-PHOSPHOC
lig 21
6OU
D
1208 33 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 22
6OU
B
1201 33 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 23
9BE
B
1202 10N-BENZYLTHIOFORMAMIDE
lig 24
6OU
B
1203 28 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 25
6OU
B
1204 29 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 26
6OU
B
1205 48 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 27
6OU
B
1206 41 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 28
LBN
B
1207 521-PALMITOYL-2-OLEOYL-SN-GLYCERO-3-PHOSPHOC
lig 29
6OU
C
1201 41 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 30
6OU
C
1202 33 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 31
9BE
C
1203 10N-BENZYLTHIOFORMAMIDE
lig 32
6OU
C
1204 28 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 33
6OU
C
1205 29 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 34
6OU
C
1206 48 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 35
6OU
C
1207 41 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 36
LBN
C
1208 521-PALMITOYL-2-OLEOYL-SN-GLYCERO-3-PHOSPHOC