Analysis of Ligand-Protein Contacts in PDB entry:
6PY9


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 100 ligands in PDB entry 6PY9. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
FUC
E
2 10ALPHA-L-FUCOPYRANOSE
lig 3
NAG
E
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
FUC
F
2 10ALPHA-L-FUCOPYRANOSE
lig 6
NAG
F
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
FUC
G
2 10ALPHA-L-FUCOPYRANOSE
lig 9
NAG
G
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
FUC
H
2 10ALPHA-L-FUCOPYRANOSE
lig 12
NAG
H
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
ZN
A
501 1ZINC ION
lig 14
FE
A
502 1FE (III) ION
lig 15
NAG
A
503 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
A
504 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
A
508 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
AD9
A
509 31ADP METAVANADATE
lig 19
SO4
A
510 5SULFATE ION
lig 20
SO4
A
511 5SULFATE ION
lig 21
SO4
A
512 5SULFATE ION
lig 22
NA
A
513 1SODIUM ION
lig 23
EDO
A
514 41,2-ETHANEDIOL
lig 24
EDO
A
515 41,2-ETHANEDIOL
lig 25
EDO
A
516 41,2-ETHANEDIOL
lig 26
EDO
A
517 41,2-ETHANEDIOL
lig 27
EDO
A
518 41,2-ETHANEDIOL
lig 28
EDO
A
519 41,2-ETHANEDIOL
lig 29
EDO
A
520 41,2-ETHANEDIOL
lig 30
EDO
A
521 41,2-ETHANEDIOL
lig 31
EDO
A
522 41,2-ETHANEDIOL
lig 32
GOL
A
523 6GLYCEROL
lig 33
GOL
A
524 6GLYCEROL
lig 34
GOL
A
525 6GLYCEROL
lig 35
GOL
A
526 6GLYCEROL
lig 36
GOL
A
527 6GLYCEROL
lig 37
GOL
A
528 6GLYCEROL
lig 38
PGE
A
529 10TRIETHYLENE GLYCOL
lig 39
PGE
A
530 7TRIETHYLENE GLYCOL
lig 40
ZN
B
501 1ZINC ION
lig 41
FE
B
502 1FE (III) ION
lig 42
NAG
B
503 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 43
NAG
B
504 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 44
NAG
B
505 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 45
P4J
B
509 38 YL]OXY-TRIS(OXIDANYL)VANADIUM
lig 46
SO4
B
510 5SULFATE ION
lig 47
SO4
B
511 5SULFATE ION
lig 48
NA
B
512 1SODIUM ION
lig 49
EDO
B
513 41,2-ETHANEDIOL
lig 50
EDO
B
514 41,2-ETHANEDIOL
lig 51
EDO
B
515 41,2-ETHANEDIOL
lig 52
EDO
B
516 41,2-ETHANEDIOL
lig 53
EDO
B
517 41,2-ETHANEDIOL
lig 54
EDO
B
518 41,2-ETHANEDIOL
lig 55
EDO
B
519 41,2-ETHANEDIOL
lig 56
GOL
B
520 6GLYCEROL
lig 57
GOL
B
521 6GLYCEROL
lig 58
GOL
B
522 6GLYCEROL
lig 59
GOL
B
523 6GLYCEROL
lig 60
PGE
B
524 7TRIETHYLENE GLYCOL
lig 61
CL
B
525 1CHLORIDE ION
lig 62
ZN
D
501 1ZINC ION
lig 63
FE
D
502 1FE (III) ION
lig 64
NAG
D
503 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 65
NAG
D
507 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 66
NAG
D
508 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 67
SO4
D
509 5SULFATE ION
lig 68
SO4
D
510 5SULFATE ION
lig 69
SO4
D
511 5SULFATE ION
lig 70
SO4
D
512 5SULFATE ION
lig 71
SO4
D
513 5SULFATE ION
lig 72
NA
D
514 1SODIUM ION
lig 73
EDO
D
515 41,2-ETHANEDIOL
lig 74
EDO
D
516 41,2-ETHANEDIOL
lig 75
EDO
D
517 41,2-ETHANEDIOL
lig 76
EDO
D
518 41,2-ETHANEDIOL
lig 77
GOL
D
519 6GLYCEROL
lig 78
ZN
C
501 1ZINC ION
lig 79
FE
C
502 1FE (III) ION
lig 80
NAG
C
503 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 81
NAG
C
507 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 82
AD9
C
508 31ADP METAVANADATE
lig 83
SO4
C
509 5SULFATE ION
lig 84
EDO
C
510 41,2-ETHANEDIOL
lig 85
EDO
C
511 41,2-ETHANEDIOL
lig 86
EDO
C
512 41,2-ETHANEDIOL
lig 87
EDO
C
513 41,2-ETHANEDIOL
lig 88
EDO
C
514 41,2-ETHANEDIOL
lig 89
EDO
C
515 41,2-ETHANEDIOL
lig 90
EDO
C
516 41,2-ETHANEDIOL
lig 91
EDO
C
517 41,2-ETHANEDIOL
lig 92
EDO
C
518 41,2-ETHANEDIOL
lig 93
EDO
C
519 41,2-ETHANEDIOL
lig 94
EDO
C
520 41,2-ETHANEDIOL
lig 95
EDO
C
521 41,2-ETHANEDIOL
lig 96
GOL
C
522 6GLYCEROL
lig 97
GOL
C
523 6GLYCEROL
lig 98
FLC
C
524 13CITRATE ANION
lig 99
FLC
C
525 13CITRATE ANION
lig 100
PGE
C
526 7TRIETHYLENE GLYCOL