Analysis of Ligand-Protein Contacts in PDB entry:
6Q04


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 135 ligands in PDB entry 6Q04. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 5
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 10
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 11
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 12
MAN
F
6 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
F
7 11ALPHA-D-MANNOPYRANOSE
lig 14
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 17
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 20
MAN
H
4 11ALPHA-D-MANNOPYRANOSE
lig 21
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
BMA
K
3 11BETA-D-MANNOPYRANOSE
lig 28
MAN
K
4 11ALPHA-D-MANNOPYRANOSE
lig 29
MAN
K
5 11ALPHA-D-MANNOPYRANOSE
lig 30
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
NAG
L
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
BMA
L
3 11BETA-D-MANNOPYRANOSE
lig 33
MAN
L
4 11ALPHA-D-MANNOPYRANOSE
lig 34
MAN
L
5 11ALPHA-D-MANNOPYRANOSE
lig 35
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 39
BMA
N
3 11BETA-D-MANNOPYRANOSE
lig 40
MAN
N
4 11ALPHA-D-MANNOPYRANOSE
lig 41
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 42
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 43
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 44
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 45
BMA
P
3 11BETA-D-MANNOPYRANOSE
lig 46
MAN
P
4 11ALPHA-D-MANNOPYRANOSE
lig 47
MAN
P
5 11ALPHA-D-MANNOPYRANOSE
lig 48
MAN
P
6 11ALPHA-D-MANNOPYRANOSE
lig 49
MAN
P
7 11ALPHA-D-MANNOPYRANOSE
lig 50
NAG
Q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 51
NAG
Q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 52
BMA
Q
3 11BETA-D-MANNOPYRANOSE
lig 53
NAG
R
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 54
NAG
R
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 55
BMA
R
3 11BETA-D-MANNOPYRANOSE
lig 56
MAN
R
4 11ALPHA-D-MANNOPYRANOSE
lig 57
NAG
S
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 58
NAG
S
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 59
NAG
T
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 60
NAG
T
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 61
NAG
U
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 62
NAG
U
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 63
BMA
U
3 11BETA-D-MANNOPYRANOSE
lig 64
MAN
U
4 11ALPHA-D-MANNOPYRANOSE
lig 65
MAN
U
5 11ALPHA-D-MANNOPYRANOSE
lig 66
NAG
V
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 67
NAG
V
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 68
BMA
V
3 11BETA-D-MANNOPYRANOSE
lig 69
MAN
V
4 11ALPHA-D-MANNOPYRANOSE
lig 70
MAN
V
5 11ALPHA-D-MANNOPYRANOSE
lig 71
NAG
W
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 72
NAG
W
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 73
NAG
X
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 74
NAG
X
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 75
BMA
X
3 11BETA-D-MANNOPYRANOSE
lig 76
MAN
X
4 11ALPHA-D-MANNOPYRANOSE
lig 77
NAG
Y
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 78
NAG
Y
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 79
NAG
Z
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 80
NAG
Z
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 81
BMA
Z
3 11BETA-D-MANNOPYRANOSE
lig 82
MAN
Z
4 11ALPHA-D-MANNOPYRANOSE
lig 83
MAN
Z
5 11ALPHA-D-MANNOPYRANOSE
lig 84
MAN
Z
6 11ALPHA-D-MANNOPYRANOSE
lig 85
MAN
Z
7 11ALPHA-D-MANNOPYRANOSE
lig 86
NAG
a
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 87
NAG
a
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 88
BMA
a
3 11BETA-D-MANNOPYRANOSE
lig 89
NAG
b
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 90
NAG
b
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 91
BMA
b
3 11BETA-D-MANNOPYRANOSE
lig 92
MAN
b
4 11ALPHA-D-MANNOPYRANOSE
lig 93
NAG
c
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 94
NAG
c
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 95
NAG
d
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 96
NAG
d
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 97
NAG
e
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 98
NAG
e
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 99
BMA
e
3 11BETA-D-MANNOPYRANOSE
lig 100
MAN
e
4 11ALPHA-D-MANNOPYRANOSE
lig 101
MAN
e
5 11ALPHA-D-MANNOPYRANOSE
lig 102
NAG
f
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 103
NAG
f
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 104
BMA
f
3 11BETA-D-MANNOPYRANOSE
lig 105
MAN
f
4 11ALPHA-D-MANNOPYRANOSE
lig 106
MAN
f
5 11ALPHA-D-MANNOPYRANOSE
lig 107
NAG
g
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 108
NAG
g
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 109
NAG
A
1414 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 110
NAG
A
1415 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 111
NAG
A
1416 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 112
NAG
A
1417 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 113
NAG
A
1418 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 114
NAG
A
1419 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 115
NAG
A
1436 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 116
FOL
A
1444 32FOLIC ACID
lig 117
SIA
A
1445 21N-ACETYL-ALPHA-NEURAMINIC ACID
lig 118
NAG
B
1414 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 119
NAG
B
1415 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 120
NAG
B
1416 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 121
NAG
B
1417 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 122
NAG
B
1418 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 123
NAG
B
1419 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 124
NAG
B
1436 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 125
FOL
B
1444 32FOLIC ACID
lig 126
SIA
B
1445 21N-ACETYL-ALPHA-NEURAMINIC ACID
lig 127
NAG
C
1414 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 128
NAG
C
1415 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 129
NAG
C
1416 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 130
NAG
C
1417 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 131
NAG
C
1418 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 132
NAG
C
1419 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 133
NAG
C
1436 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 134
FOL
C
1444 32FOLIC ACID
lig 135
SIA
C
1445 21N-ACETYL-ALPHA-NEURAMINIC ACID