Analysis of Ligand-Protein Contacts in PDB entry:
6Q87


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 17 ligands in PDB entry 6Q87. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
DLE
B
2 8D-LEUCINE
lig 2
DLE
B
3 8D-LEUCINE
lig 3
DLY
B
4 9D-LYSINE
lig 4
DAL
B
5 5D-ALANINE
lig 5
DLE
B
6 8D-LEUCINE
lig 6
DLY
B
7 9D-LYSINE
lig 7
DLY
B
8 5D-LYSINE
lig 8
DLE
B
9 8D-LEUCINE
lig 9
DAL
B
10 5D-ALANINE
lig 10
DLY
B
11 5D-LYSINE
lig 11
DLY
B
12 9D-LYSINE
lig 12
DTY
B
13 12D-TYROSINE
lig 13
DLY
B
14 9D-LYSINE
lig 14
CA
A
301 1CALCIUM ION
lig 15
CA
A
302 1CALCIUM ION
lig 16
ZDC
B
1 133,7-ANHYDRO-2,8-DIDEOXY-L-GLYCERO-D-GLUCO-
lig 17
NH2
B
202 1AMINO GROUP