Analysis of Ligand-Protein Contacts in PDB entry:
6RF1


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 73 ligands in PDB entry 6RF1. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
OLC
A
301 22(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 2
OLC
A
302 25(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 3
OLC
A
303 13(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 4
OLC
A
304 15(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 5
LFA
A
305 8EICOSANE
lig 6
LFA
A
306 5EICOSANE
lig 7
LFA
A
307 8EICOSANE
lig 8
LFA
A
308 4EICOSANE
lig 9
LFA
A
309 6EICOSANE
lig 10
NA
A
310 1SODIUM ION
lig 11
BOG
A
311 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 12
OLC
A
312 25(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 13
LFA
A
313 20EICOSANE
lig 14
NA
A
314 1SODIUM ION
lig 15
RET
A
315 20RETINAL
lig 16
LFA
B
301 20EICOSANE
lig 17
OLC
B
302 20(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 18
OLC
B
303 16(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 19
OLC
B
304 17(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 20
LFA
B
305 9EICOSANE
lig 21
LFA
B
306 5EICOSANE
lig 22
LFA
B
307 10EICOSANE
lig 23
LFA
B
308 7EICOSANE
lig 24
LFA
B
309 6EICOSANE
lig 25
NA
B
310 1SODIUM ION
lig 26
BOG
B
311 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 27
RET
B
312 20RETINAL
lig 28
OLC
C
301 21(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 29
OLC
C
302 20(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 30
OLC
C
303 16(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 31
LFA
C
304 20EICOSANE
lig 32
OLC
C
305 23(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 33
OLC
C
306 15(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 34
OLC
C
307 16(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 35
OLC
C
308 16(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 36
LFA
C
309 7EICOSANE
lig 37
LFA
C
310 8EICOSANE
lig 38
LFA
C
311 12EICOSANE
lig 39
LFA
C
312 11EICOSANE
lig 40
LFA
C
313 4EICOSANE
lig 41
LFA
C
314 6EICOSANE
lig 42
NA
C
315 1SODIUM ION
lig 43
BOG
C
316 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 44
RET
C
317 20RETINAL
lig 45
OLC
D
301 18(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 46
LFA
D
302 20EICOSANE
lig 47
OLC
D
303 25(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 48
OLC
D
304 18(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 49
OLC
D
305 14(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 50
OLC
D
306 25(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 51
LFA
D
307 16EICOSANE
lig 52
LFA
D
308 20EICOSANE
lig 53
LFA
D
309 8EICOSANE
lig 54
LFA
D
310 17EICOSANE
lig 55
LFA
D
311 7EICOSANE
lig 56
LFA
D
312 6EICOSANE
lig 57
LFA
D
313 20EICOSANE
lig 58
NA
D
314 1SODIUM ION
lig 59
BOG
D
315 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 60
RET
D
316 20RETINAL
lig 61
OLC
E
301 24(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 62
OLC
E
302 15(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 63
OLC
E
303 25(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 64
LFA
E
304 8EICOSANE
lig 65
LFA
E
305 6EICOSANE
lig 66
LFA
E
306 14EICOSANE
lig 67
LFA
E
307 4EICOSANE
lig 68
LFA
E
308 5EICOSANE
lig 69
LFA
E
309 6EICOSANE
lig 70
BOG
E
310 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 71
LFA
E
311 4EICOSANE
lig 72
LFA
E
312 14EICOSANE
lig 73
RET
E
313 20RETINAL