Analysis of Ligand-Protein Contacts in PDB entry:
6RF3


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 108 ligands in PDB entry 6RF3. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
LYR
A
255 29 TETRAENYL]LYSINE
lig 2
LYR
B
255 29 TETRAENYL]LYSINE
lig 3
LYR
C
255 29 TETRAENYL]LYSINE
lig 4
LYR
D
255 29 TETRAENYL]LYSINE
lig 5
LYR
E
255 29 TETRAENYL]LYSINE
lig 6
OLC
A
301 15(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 7
OLC
A
302 25(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 8
OLC
A
303 22(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 9
OLC
A
304 25(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 10
OLC
A
305 13(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 11
OLC
A
306 15(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 12
OLC
A
307 16(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 13
OLC
A
308 25(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 14
OLC
A
309 15(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 15
OLC
A
310 16(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 16
OLC
A
311 16(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 17
LFA
A
312 7EICOSANE
lig 18
LFA
A
313 8EICOSANE
lig 19
LFA
A
314 8EICOSANE
lig 20
LFA
A
315 12EICOSANE
lig 21
LFA
A
316 4EICOSANE
lig 22
LFA
A
317 6EICOSANE
lig 23
LFA
A
318 20EICOSANE
lig 24
NA
A
319 1SODIUM ION
lig 25
BOG
A
320 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 26
OLC
A
321 25(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 27
OLC
B
301 25(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 28
LFA
B
302 20EICOSANE
lig 29
OLC
B
303 14(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 30
OLC
B
304 25(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 31
OLC
B
305 15(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 32
OLC
B
306 20(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 33
OLC
B
307 24(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 34
OLC
B
308 20(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 35
OLC
B
309 21(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 36
OLC
B
310 16(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 37
OLC
B
311 25(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 38
OLC
B
312 16(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 39
OLC
B
313 17(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 40
OLC
B
314 15(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 41
OLC
B
315 16(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 42
LFA
B
316 9EICOSANE
lig 43
LFA
B
317 8EICOSANE
lig 44
LFA
B
318 10EICOSANE
lig 45
LFA
B
319 7EICOSANE
lig 46
NA
B
320 1SODIUM ION
lig 47
BOG
B
321 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 48
OLC
C
301 21(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 49
LFA
C
302 20EICOSANE
lig 50
OLC
C
303 14(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 51
OLC
C
304 21(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 52
OLC
C
305 23(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 53
OLC
C
306 25(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 54
OLC
C
307 25(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 55
OLC
C
308 22(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 56
OLC
C
309 16(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 57
OLC
C
310 25(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 58
OLC
C
311 16(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 59
OLC
C
312 16(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 60
OLC
C
313 16(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 61
LFA
C
314 7EICOSANE
lig 62
LFA
C
315 8EICOSANE
lig 63
LFA
C
316 20EICOSANE
lig 64
LFA
C
317 11EICOSANE
lig 65
LFA
C
318 4EICOSANE
lig 66
LFA
C
319 20EICOSANE
lig 67
NA
C
320 1SODIUM ION
lig 68
BOG
C
321 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 69
OLC
D
301 18(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 70
OLC
D
302 13(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 71
OLC
D
303 25(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 72
OLC
D
304 18(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 73
OLC
D
305 23(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 74
OLC
D
306 25(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 75
OLC
D
307 14(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 76
OLC
D
308 15(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 77
OLC
D
309 25(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 78
LFA
D
310 20EICOSANE
lig 79
LFA
D
311 20EICOSANE
lig 80
LFA
D
312 8EICOSANE
lig 81
LFA
D
313 17EICOSANE
lig 82
LFA
D
314 7EICOSANE
lig 83
LFA
D
315 6EICOSANE
lig 84
NA
D
316 1SODIUM ION
lig 85
BOG
D
317 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 86
OLC
E
301 25(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 87
LFA
E
302 20EICOSANE
lig 88
OLC
E
303 14(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 89
OLC
E
304 16(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 90
OLC
E
305 24(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 91
OLC
E
306 24(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 92
OLC
E
307 20(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 93
OLC
E
308 15(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 94
OLC
E
309 25(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 95
OLC
E
310 15(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 96
OLC
E
311 11(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 97
OLC
E
312 25(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 98
OLC
E
313 20(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 99
OLC
E
314 25(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 100
LFA
E
315 8EICOSANE
lig 101
LFA
E
316 14EICOSANE
lig 102
LFA
E
317 4EICOSANE
lig 103
LFA
E
318 5EICOSANE
lig 104
LFA
E
319 20EICOSANE
lig 105
NA
E
320 1SODIUM ION
lig 106
BOG
E
321 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 107
LFA
E
322 4EICOSANE
lig 108
LFA
E
323 14EICOSANE