Analysis of Ligand-Protein Contacts in PDB entry:
6RF4


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 69 ligands in PDB entry 6RF4. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
OLC
A
301 14(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 2
OLC
A
302 13(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 3
OLC
A
303 15(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 4
LFA
A
304 7EICOSANE
lig 5
LFA
A
305 8EICOSANE
lig 6
LFA
A
306 8EICOSANE
lig 7
LFA
A
307 12EICOSANE
lig 8
LFA
A
308 6EICOSANE
lig 9
NA
A
309 1SODIUM ION
lig 10
BOG
A
310 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 11
OLC
A
311 14(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 12
LFA
A
312 20EICOSANE
lig 13
RET
A
313 20RETINAL
lig 14
OLC
B
301 22(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 15
LFA
B
302 20EICOSANE
lig 16
OLC
B
303 20(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 17
OLC
B
304 16(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 18
LFA
B
305 9EICOSANE
lig 19
LFA
B
306 8EICOSANE
lig 20
NA
B
307 1SODIUM ION
lig 21
BOG
B
308 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 22
RET
B
309 20RETINAL
lig 23
OLC
C
301 21(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 24
OLC
C
302 20(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 25
LFA
C
303 20EICOSANE
lig 26
OLC
C
304 14(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 27
OLC
C
305 21(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 28
OLC
C
306 23(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 29
OLC
C
307 25(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 30
OLC
C
308 25(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 31
OLC
C
309 22(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 32
OLC
C
310 16(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 33
OLC
C
311 25(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 34
OLC
C
312 16(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 35
OLC
C
313 16(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 36
OLC
C
314 16(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 37
LFA
C
315 7EICOSANE
lig 38
LFA
C
316 8EICOSANE
lig 39
LFA
C
317 20EICOSANE
lig 40
LFA
C
318 11EICOSANE
lig 41
LFA
C
319 4EICOSANE
lig 42
NA
C
320 1SODIUM ION
lig 43
BOG
C
321 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 44
LFA
C
322 4EICOSANE
lig 45
RET
C
323 20RETINAL
lig 46
OLC
D
301 18(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 47
LFA
D
302 20EICOSANE
lig 48
OLC
D
303 14(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 49
LFA
D
304 20EICOSANE
lig 50
LFA
D
305 20EICOSANE
lig 51
LFA
D
306 8EICOSANE
lig 52
LFA
D
307 17EICOSANE
lig 53
LFA
D
308 7EICOSANE
lig 54
LFA
D
309 6EICOSANE
lig 55
NA
D
310 1SODIUM ION
lig 56
BOG
D
311 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 57
RET
D
312 20RETINAL
lig 58
OLC
E
301 12(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 59
LFA
E
302 20EICOSANE
lig 60
OLC
E
303 16(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 61
OLC
E
304 25(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 62
LFA
E
305 8EICOSANE
lig 63
LFA
E
306 14EICOSANE
lig 64
LFA
E
307 4EICOSANE
lig 65
LFA
E
308 5EICOSANE
lig 66
NA
E
309 1SODIUM ION
lig 67
BOG
E
310 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 68
LFA
E
311 14EICOSANE
lig 69
RET
E
312 20RETINAL