Analysis of Ligand-Protein Contacts in PDB entry:
6RFJ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 7 ligands in PDB entry 6RFJ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
TPO
A
345 11PHOSPHOTHREONINE
lig 2
SEP
A
346 10PHOSPHOSERINE
lig 3
TPO
B
345 11PHOSPHOTHREONINE
lig 4
SEP
B
346 10PHOSPHOSERINE
lig 5
K1E
A
501 37 YL]AMINO]CYCLOHEXYL]PIPERAZINE-1-CARBOXYL
lig 6
SO4
B
501 5SULFATE ION
lig 7
K1E
B
502 37 YL]AMINO]CYCLOHEXYL]PIPERAZINE-1-CARBOXYL