Analysis of Ligand-Protein Contacts in PDB entry:
6RKO


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 9 ligands in PDB entry 6RKO. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
UQ8
B
401 53UBIQUINONE-8
lig 2
POV
B
402 52 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 3
POV
B
403 38 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 4
POV
A
601 52 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 5
POV
A
602 43 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 6
HDD
A
603 44CIS-HEME D HYDROXYCHLORIN GAMMA-SPIROLACTO
lig 7
HEB
A
604 43HEME B/C
lig 8
HEB
A
605 43HEME B/C
lig 9
OXY
A
606 2OXYGEN MOLECULE