Analysis of Ligand-Protein Contacts in PDB entry:
6ROI


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 10 ligands in PDB entry 6ROI. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
BFD
A
560 12ASPARTATE BERYLLIUM TRIFLUORIDE
lig 2
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 7
BMA
D
4 11BETA-D-MANNOPYRANOSE
lig 8
MG
A
1501 1MAGNESIUM ION
lig 9
2Y5
A
1502 65 TETRAENOATE
lig 10
NAG
C
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE