Analysis of Ligand-Protein Contacts in PDB entry:
6RS8


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 8 ligands in PDB entry 6RS8. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SEP
A
25 10PHOSPHOSERINE
lig 2
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
MAN
A
401 11ALPHA-D-MANNOPYRANOSE
lig 5
MES
A
402 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 6
MPD
A
403 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 7
ACT
A
404 4ACETATE ION
lig 8
ACT
A
405 4ACETATE ION