Analysis of Ligand-Protein Contacts in PDB entry:
6RVD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 17 ligands in PDB entry 6RVD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
CLR
A
1501 28CHOLESTEROL
lig 4
NAG
A
1502 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
A
1503 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
A
1504 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
A
1505 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
A
1508 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
CLR
B
1501 28CHOLESTEROL
lig 10
CLR
B
1502 28CHOLESTEROL
lig 11
NAG
B
1503 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
B
1504 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
PLM
C
201 17PALMITIC ACID
lig 14
CLR
C
202 28CHOLESTEROL
lig 15
ZN
C
203 1ZINC ION
lig 16
CA
C
204 1CALCIUM ION
lig 17
CA
C
205 1CALCIUM ION