Analysis of Ligand-Protein Contacts in PDB entry:
6S82


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 84 ligands in PDB entry 6S82. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
C
5 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
C
6 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
C
7 11ALPHA-D-MANNOPYRANOSE
lig 8
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 11
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 12
MAN
D
5 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
D
6 11ALPHA-D-MANNOPYRANOSE
lig 14
MAN
D
7 11ALPHA-D-MANNOPYRANOSE
lig 15
MAN
D
8 11ALPHA-D-MANNOPYRANOSE
lig 16
MAN
D
9 11ALPHA-D-MANNOPYRANOSE
lig 17
MAN
D
10 11ALPHA-D-MANNOPYRANOSE
lig 18
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 23
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 24
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 25
MAN
F
6 11ALPHA-D-MANNOPYRANOSE
lig 26
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 29
MAN
G
4 11ALPHA-D-MANNOPYRANOSE
lig 30
MAN
G
5 11ALPHA-D-MANNOPYRANOSE
lig 31
MAN
G
6 11ALPHA-D-MANNOPYRANOSE
lig 32
MAN
G
7 11ALPHA-D-MANNOPYRANOSE
lig 33
MAN
G
8 11ALPHA-D-MANNOPYRANOSE
lig 34
MAN
G
9 11ALPHA-D-MANNOPYRANOSE
lig 35
MAN
G
10 11ALPHA-D-MANNOPYRANOSE
lig 36
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
TRS
A
1000 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 39
PLQ
A
1001 81,4-BENZOQUINONE
lig 40
EDO
A
1002 41,2-ETHANEDIOL
lig 41
EDO
A
1003 41,2-ETHANEDIOL
lig 42
PLQ
A
1004 81,4-BENZOQUINONE
lig 43
PLQ
A
1005 81,4-BENZOQUINONE
lig 44
PLQ
A
1006 81,4-BENZOQUINONE
lig 45
PLQ
A
1007 81,4-BENZOQUINONE
lig 46
PLQ
A
1008 81,4-BENZOQUINONE
lig 47
PLQ
A
1009 81,4-BENZOQUINONE
lig 48
PLQ
A
1010 81,4-BENZOQUINONE
lig 49
PLQ
A
1011 81,4-BENZOQUINONE
lig 50
NAG
A
1052 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 51
NAG
A
1215 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 52
NAG
A
1236 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 53
NAG
A
1242 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 54
NAG
A
1319 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 55
NAG
A
1357 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 56
NAG
A
1444 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 57
NAG
A
1471 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 58
NAG
A
1483 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 59
NAG
A
1512 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 60
NAG
A
1539 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 61
NAG
A
1555 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 62
NAG
A
1606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 63
NAG
A
1644 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 64
TRS
B
1000 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 65
PLQ
B
1001 81,4-BENZOQUINONE
lig 66
EDO
B
1002 41,2-ETHANEDIOL
lig 67
EDO
B
1003 41,2-ETHANEDIOL
lig 68
PLQ
B
1004 81,4-BENZOQUINONE
lig 69
PLQ
B
1005 81,4-BENZOQUINONE
lig 70
PLQ
B
1006 81,4-BENZOQUINONE
lig 71
PLQ
B
1007 81,4-BENZOQUINONE
lig 72
PLQ
B
1008 81,4-BENZOQUINONE
lig 73
PLQ
B
1009 81,4-BENZOQUINONE
lig 74
NAG
B
1052 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 75
NAG
B
1215 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 76
NAG
B
1242 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 77
NAG
B
1319 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 78
NAG
B
1357 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 79
NAG
B
1444 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 80
NAG
B
1471 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 81
NAG
B
1483 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 82
NAG
B
1539 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 83
NAG
B
1555 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 84
NAG
B
1644 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE