Analysis of Ligand-Protein Contacts in PDB entry:
6SE9


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 11 ligands in PDB entry 6SE9. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
BGC
B
1 12BETA-D-GLUCOPYRANOSE
lig 2
GAL
B
2 11BETA-D-GALACTOPYRANOSE
lig 3
NA
A
1101 1SODIUM ION
lig 4
NA
A
1102 1SODIUM ION
lig 5
ACT
A
1104 4ACETATE ION
lig 6
ACT
A
1105 4ACETATE ION
lig 7
MLI
A
1106 7MALONATE ION
lig 8
FMT
A
1107 3FORMIC ACID
lig 9
FRU
A
1108 12BETA-D-FRUCTOFURANOSE
lig 10
FRU
A
1109 12BETA-D-FRUCTOFURANOSE
lig 11
GAL
A
1110 12BETA-D-GALACTOPYRANOSE