Analysis of Ligand-Protein Contacts in PDB entry:
6SED


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 17 ligands in PDB entry 6SED. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GAL
A
1101 12BETA-D-GALACTOPYRANOSE
lig 2
ACT
A
1102 4ACETATE ION
lig 3
ACT
A
1103 4ACETATE ION
lig 4
ACT
A
1104 4ACETATE ION
lig 5
ACT
A
1105 4ACETATE ION
lig 6
ACT
A
1106 4ACETATE ION
lig 7
ACT
A
1107 4ACETATE ION
lig 8
ACT
A
1108 4ACETATE ION
lig 9
MLI
A
1109 7MALONATE ION
lig 10
FMT
A
1110 3FORMIC ACID
lig 11
FMT
A
1111 3FORMIC ACID
lig 12
FMT
A
1112 3FORMIC ACID
lig 13
FMT
A
1113 3FORMIC ACID
lig 14
FMT
A
1114 3FORMIC ACID
lig 15
NA
A
1115 1SODIUM ION
lig 16
NA
A
1116 1SODIUM ION
lig 17
NA
A
1117 1SODIUM ION