Analysis of Ligand-Protein Contacts in PDB entry:
6SIO


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 6 ligands in PDB entry 6SIO. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
TPO
P
387 11PHOSPHOTHREONINE
lig 2
MG
A
301 1MAGNESIUM ION
lig 3
MG
A
302 1MAGNESIUM ION
lig 4
CL
A
303 1CHLORIDE ION
lig 5
LFQ
A
304 155-METHYL-4-PHENYL-THIOPHENE-2-CARBOXIMIDAM
lig 6
LFQ
A
305 155-METHYL-4-PHENYL-THIOPHENE-2-CARBOXIMIDAM