Analysis of Ligand-Protein Contacts in PDB entry:
6STF


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 15 ligands in PDB entry 6STF. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SEP
A
111 10PHOSPHOSERINE
lig 2
SEP
B
111 10PHOSPHOSERINE
lig 3
SEP
C
111 10PHOSPHOSERINE
lig 4
SEP
D
111 10PHOSPHOSERINE
lig 5
SEP
E
111 10PHOSPHOSERINE
lig 6
GDP
A
901 28GUANOSINE-5'-DIPHOSPHATE
lig 7
MG
A
902 1MAGNESIUM ION
lig 8
GDP
B
901 28GUANOSINE-5'-DIPHOSPHATE
lig 9
MG
B
902 1MAGNESIUM ION
lig 10
GDP
C
901 28GUANOSINE-5'-DIPHOSPHATE
lig 11
MG
C
902 1MAGNESIUM ION
lig 12
GDP
D
901 28GUANOSINE-5'-DIPHOSPHATE
lig 13
MG
D
902 1MAGNESIUM ION
lig 14
GDP
E
901 28GUANOSINE-5'-DIPHOSPHATE
lig 15
MG
E
902 1MAGNESIUM ION