Analysis of Ligand-Protein Contacts in PDB entry:
6SWD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 62 ligands in PDB entry 6SWD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
4AC
2
17 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 2
4AC
2
53 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 3
LHH
2
250 24 OXOLAN-2-YL]METHYL DIHYDROGEN PHOSPHATE
lig 4
4AC
2
286 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 5
4AC
2
303 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 6
4AC
2
319 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 7
A2M
2
373 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 8
4AC
2
379 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 9
4AC
2
394 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 10
4AC
2
479 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 11
4AC
2
511 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 12
4AC
2
546 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 13
4AC
2
590 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 14
4AC
2
626 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 15
4AC
2
636 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 16
4AC
2
648 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 17
4AC
2
703 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 18
4AC
2
718 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 19
4AC
2
731 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 20
4AC
2
751 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 21
4AC
2
828 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 22
4AC
2
839 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 23
4AC
2
848 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 24
4AC
2
851 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 25
4AC
2
868 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 26
OMC
2
1376 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 27
5HM
2
1378 225-(HYDROXYMETHYL)CYTIDINE 5'-(DIHYDROGEN P
lig 28
UR3
2
1467 213-METHYLURIDINE-5'-MONOPHOSHATE
lig 29
6MZ
2
1469 23N6-METHYLADENOSINE-5'-MONOPHOSPHATE
lig 30
4AC
2
1479 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 31
MA6
2
1487 246N-DIMETHYLADENOSINE-5'-MONOPHOSHATE
lig 32
MA6
2
1488 246N-DIMETHYLADENOSINE-5'-MONOPHOSHATE
lig 33
MG
2
1601 1MAGNESIUM ION
lig 34
MG
2
1602 1MAGNESIUM ION
lig 35
MG
2
1603 1MAGNESIUM ION
lig 36
MG
2
1604 1MAGNESIUM ION
lig 37
MG
2
1605 1MAGNESIUM ION
lig 38
MG
2
1606 1MAGNESIUM ION
lig 39
MG
2
1607 1MAGNESIUM ION
lig 40
MG
2
1608 1MAGNESIUM ION
lig 41
MG
2
1609 1MAGNESIUM ION
lig 42
MG
2
1610 1MAGNESIUM ION
lig 43
MG
2
1611 1MAGNESIUM ION
lig 44
MG
2
1612 1MAGNESIUM ION
lig 45
MG
2
1613 1MAGNESIUM ION
lig 46
MG
2
1614 1MAGNESIUM ION
lig 47
MG
2
1615 1MAGNESIUM ION
lig 48
MG
2
1616 1MAGNESIUM ION
lig 49
MG
2
1617 1MAGNESIUM ION
lig 50
MG
2
1618 1MAGNESIUM ION
lig 51
MG
2
1619 1MAGNESIUM ION
lig 52
MG
2
1620 1MAGNESIUM ION
lig 53
MG
2
1621 1MAGNESIUM ION
lig 54
MG
2
1622 1MAGNESIUM ION
lig 55
MG
2
1623 1MAGNESIUM ION
lig 56
MG
2
1624 1MAGNESIUM ION
lig 57
ZN
C
101 1ZINC ION
lig 58
ZN
C
102 1ZINC ION
lig 59
ZN
F
301 1ZINC ION
lig 60
ZN
R
201 1ZINC ION
lig 61
ZN
W
101 1ZINC ION
lig 62
MG
5
901 1MAGNESIUM ION