Analysis of Ligand-Protein Contacts in PDB entry:
6TCH


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 14 ligands in PDB entry 6TCH. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NVA
A
1 5NORVALINE
lig 2
PPN
A
2 14PARA-NITROPHENYLALANINE
lig 3
KCJ
A
3 103-(1,3-THIAZOL-4-YL)-L-ALANINE
lig 4
SEP
A
4 10PHOSPHOSERINE
lig 5
PPN
A
5 14PARA-NITROPHENYLALANINE
lig 6
B3S
A
6 7(3R)-3-AMINO-4-HYDROXYBUTANOIC ACID
lig 7
BAL
A
7 5BETA-ALANINE
lig 8
PPN
A
8 14PARA-NITROPHENYLALANINE
lig 9
NH2
A
10 1AMINO GROUP
lig 10
MG
B
301 1MAGNESIUM ION
lig 11
MG
B
302 1MAGNESIUM ION
lig 12
MG
B
303 1MAGNESIUM ION
lig 13
MG
B
304 1MAGNESIUM ION
lig 14
CL
B
305 1CHLORIDE ION