Analysis of Ligand-Protein Contacts in PDB entry:
6TDV


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 61 ligands in PDB entry 6TDV. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CDL
A
501 81CARDIOLIPIN
lig 2
CDL
A
502 81CARDIOLIPIN
lig 3
CDL
A
503 82CARDIOLIPIN
lig 4
CDL
A
504 63CARDIOLIPIN
lig 5
CDL
D
201 91CARDIOLIPIN
lig 6
CDL
D
202 86CARDIOLIPIN
lig 7
LMT
D
203 35DODECYL-BETA-D-MALTOSIDE
lig 8
CDL
E
101 63CARDIOLIPIN
lig 9
LPP
F
301 24 HEXADECANOATE
lig 10
LMT
F
302 35DODECYL-BETA-D-MALTOSIDE
lig 11
TRT
G
201 25FRAGMENT OF TRITON X-100
lig 12
TRT
G
202 25FRAGMENT OF TRITON X-100
lig 13
LPP
I
101 44 HEXADECANOATE
lig 14
TRT
M
201 25FRAGMENT OF TRITON X-100
lig 15
TRT
M
202 25FRAGMENT OF TRITON X-100
lig 16
CDL
M
203 77CARDIOLIPIN
lig 17
CDL
M
204 53CARDIOLIPIN
lig 18
TRT
N
201 25FRAGMENT OF TRITON X-100
lig 19
TRT
N
202 25FRAGMENT OF TRITON X-100
lig 20
LPP
N
203 26 HEXADECANOATE
lig 21
LMT
N
204 35DODECYL-BETA-D-MALTOSIDE
lig 22
CDL
O
201 65CARDIOLIPIN
lig 23
LPP
O
202 23 HEXADECANOATE
lig 24
LPP
O
203 32 HEXADECANOATE
lig 25
CDL
P
201 48CARDIOLIPIN
lig 26
LPP
P
202 26 HEXADECANOATE
lig 27
TRT
P
203 25FRAGMENT OF TRITON X-100
lig 28
LMT
Q
101 35DODECYL-BETA-D-MALTOSIDE
lig 29
CDL
R
101 76CARDIOLIPIN
lig 30
LPP
R
102 31 HEXADECANOATE
lig 31
TRT
R
103 25FRAGMENT OF TRITON X-100
lig 32
CDL
a
501 81CARDIOLIPIN
lig 33
CDL
a
502 81CARDIOLIPIN
lig 34
CDL
a
503 82CARDIOLIPIN
lig 35
CDL
a
504 63CARDIOLIPIN
lig 36
CDL
d
201 91CARDIOLIPIN
lig 37
CDL
d
202 86CARDIOLIPIN
lig 38
LMT
d
203 35DODECYL-BETA-D-MALTOSIDE
lig 39
CDL
e
101 63CARDIOLIPIN
lig 40
LPP
f
301 24 HEXADECANOATE
lig 41
LMT
f
302 35DODECYL-BETA-D-MALTOSIDE
lig 42
TRT
g
201 25FRAGMENT OF TRITON X-100
lig 43
TRT
g
202 25FRAGMENT OF TRITON X-100
lig 44
LPP
i
101 44 HEXADECANOATE
lig 45
CDL
m
201 77CARDIOLIPIN
lig 46
CDL
m
202 53CARDIOLIPIN
lig 47
TRT
m
203 25FRAGMENT OF TRITON X-100
lig 48
TRT
m
204 25FRAGMENT OF TRITON X-100
lig 49
LMT
n
201 35DODECYL-BETA-D-MALTOSIDE
lig 50
TRT
n
202 25FRAGMENT OF TRITON X-100
lig 51
TRT
n
203 25FRAGMENT OF TRITON X-100
lig 52
CDL
o
201 65CARDIOLIPIN
lig 53
LPP
o
202 23 HEXADECANOATE
lig 54
LPP
o
203 32 HEXADECANOATE
lig 55
CDL
p
201 98CARDIOLIPIN
lig 56
CDL
p
202 48CARDIOLIPIN
lig 57
TRT
p
203 25FRAGMENT OF TRITON X-100
lig 58
LMT
q
101 35DODECYL-BETA-D-MALTOSIDE
lig 59
CDL
r
101 76CARDIOLIPIN
lig 60
LPP
r
102 31 HEXADECANOATE
lig 61
TRT
r
103 25FRAGMENT OF TRITON X-100