Analysis of Ligand-Protein Contacts in PDB entry:
6TVB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 29 ligands in PDB entry 6TVB. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
G
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
GAL
G
2 11BETA-D-GALACTOPYRANOSE
lig 3
SIA
G
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 4
NAG
H
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
GAL
H
2 11BETA-D-GALACTOPYRANOSE
lig 6
SIA
H
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 7
NAG
I
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
GAL
I
2 11BETA-D-GALACTOPYRANOSE
lig 9
SIA
I
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 10
EDO
A
404 41,2-ETHANEDIOL
lig 11
EDO
A
405 41,2-ETHANEDIOL
lig 12
NAG
B
201 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
B
202 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
EDO
B
203 41,2-ETHANEDIOL
lig 15
EDO
C
404 41,2-ETHANEDIOL
lig 16
EDO
C
405 41,2-ETHANEDIOL
lig 17
EDO
C
406 41,2-ETHANEDIOL
lig 18
EDO
C
407 41,2-ETHANEDIOL
lig 19
EDO
C
408 41,2-ETHANEDIOL
lig 20
EDO
C
409 41,2-ETHANEDIOL
lig 21
EDO
C
410 41,2-ETHANEDIOL
lig 22
EDO
C
411 41,2-ETHANEDIOL
lig 23
EDO
C
412 41,2-ETHANEDIOL
lig 24
NAG
D
201 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
EDO
D
202 41,2-ETHANEDIOL
lig 26
EDO
E
404 41,2-ETHANEDIOL
lig 27
EDO
F
201 41,2-ETHANEDIOL
lig 28
EDO
F
202 41,2-ETHANEDIOL
lig 29
EDO
F
203 41,2-ETHANEDIOL