Analysis of Ligand-Protein Contacts in PDB entry:
6UDO


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 32 ligands in PDB entry 6UDO. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
IMP
A
601 23INOSINIC ACID
lig 2
GTP
A
602 32GUANOSINE-5'-TRIPHOSPHATE
lig 3
GTP
A
603 32GUANOSINE-5'-TRIPHOSPHATE
lig 4
ATP
A
604 31ADENOSINE-5'-TRIPHOSPHATE
lig 5
IMP
B
601 23INOSINIC ACID
lig 6
GTP
B
602 32GUANOSINE-5'-TRIPHOSPHATE
lig 7
GTP
B
603 32GUANOSINE-5'-TRIPHOSPHATE
lig 8
ATP
B
604 31ADENOSINE-5'-TRIPHOSPHATE
lig 9
IMP
C
601 23INOSINIC ACID
lig 10
GTP
C
602 32GUANOSINE-5'-TRIPHOSPHATE
lig 11
GTP
C
603 32GUANOSINE-5'-TRIPHOSPHATE
lig 12
ATP
C
604 31ADENOSINE-5'-TRIPHOSPHATE
lig 13
IMP
D
601 23INOSINIC ACID
lig 14
GTP
D
602 32GUANOSINE-5'-TRIPHOSPHATE
lig 15
GTP
D
603 32GUANOSINE-5'-TRIPHOSPHATE
lig 16
ATP
D
604 31ADENOSINE-5'-TRIPHOSPHATE
lig 17
IMP
E
601 23INOSINIC ACID
lig 18
GTP
E
602 32GUANOSINE-5'-TRIPHOSPHATE
lig 19
GTP
E
603 32GUANOSINE-5'-TRIPHOSPHATE
lig 20
ATP
E
604 31ADENOSINE-5'-TRIPHOSPHATE
lig 21
IMP
F
601 23INOSINIC ACID
lig 22
GTP
F
602 32GUANOSINE-5'-TRIPHOSPHATE
lig 23
GTP
F
603 32GUANOSINE-5'-TRIPHOSPHATE
lig 24
ATP
F
604 31ADENOSINE-5'-TRIPHOSPHATE
lig 25
IMP
G
601 23INOSINIC ACID
lig 26
GTP
G
602 32GUANOSINE-5'-TRIPHOSPHATE
lig 27
GTP
G
603 32GUANOSINE-5'-TRIPHOSPHATE
lig 28
ATP
G
604 31ADENOSINE-5'-TRIPHOSPHATE
lig 29
IMP
H
601 23INOSINIC ACID
lig 30
GTP
H
602 32GUANOSINE-5'-TRIPHOSPHATE
lig 31
GTP
H
603 32GUANOSINE-5'-TRIPHOSPHATE
lig 32
ATP
H
604 31ADENOSINE-5'-TRIPHOSPHATE