Analysis of Ligand-Protein Contacts in PDB entry:
6UPP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 9 ligands in PDB entry 6UPP. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
VRB
A
601 43PHYCOVIOLOBILIN, BLUE LIGHT-ABSORBING FORM
lig 2
MG
A
602 1MAGNESIUM ION
lig 3
EDO
A
603 41,2-ETHANEDIOL
lig 4
MG
A
604 1MAGNESIUM ION
lig 5
MG
B
601 1MAGNESIUM ION
lig 6
VRB
B
602 43PHYCOVIOLOBILIN, BLUE LIGHT-ABSORBING FORM
lig 7
EDO
B
603 41,2-ETHANEDIOL
lig 8
MG
B
604 1MAGNESIUM ION
lig 9
EDO
B
605 41,2-ETHANEDIOL